Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015845757.1_cds_XP_016509434.1_22367
CDS Infomation

[gene=LOC107826902] [db_xref=GeneID:107826902] [protein=chromo domain protein LHP1-like] [protein_id=XP_016509434.1] [location=complement(join(144939..144986,145383..145443,149169..149903,150034..150120,150238..150263,150380..150628))] [gbkey=CDS]
Sequence

ATGAAAGGAGGGAAACAGAACTCCGACGCCGTCGCCGGCGACAATGGTGTCAGTTCTGAG
CAGCCATCCACCGGTGCCTCACAAGCTGAGCAGCAAGAAAGAGATGGGGATGCTGGCGAA
GAGGATGAAGATGTGGGAAAGGAGTATGAAGAGAAACTCGAAGAAGAGGAATTAGCTGAT
GTGGAAAAACCAAAGCTTGCTGAAGGCTTTTATGAGATTGAGGATGTGTGGAGAAAGAGG
GTTCGAAAGGGCAAAGTTCAGTATCTAATCAAATGGCGAGGCTGGCCGGAGAGTGCAAAC
ACATGGGAACCTGTGGAGAATCTAATGACATGCTATGATGTTATTGACGCATTTGAAGAG
AGCTTGCGGTCAGGGAAACAACGATTGGCACGTAAGCGTAAGCGGCAGCATGGGGTTACT
CACACTCAAATAAAAAAGCAGCAGCAGCAGCAGCAGTGTTCCCCTGCAGCTGCTACAAAT
GATGTGCCTGCAGTGAAGGTTAGCATAATGGAGGAACCTATGCCCTCATCTCCTCTGGCT
AGCTTGGATGCTATTAATCATGTGGATAGTAGTGGTAGTGGTTTGAATGATATCCAAGTG
GACGGAGTGGCGAACGACAATGATTTGAATTTTGATTCCTCTATAAAAGAAATTAATGAG
AAAAATGAATTGGATTTAAAGCTTAGTGAATTAAAGGGAGGGATAGCAACAAAAGAGACA
TCTGTGGATAGATCTGGTGATGGCCTTACAAGTGGATTTTCAGCAGCCAATGGAACAGAA
TCACTTCAATCTGGTCGTTGTACCGGAGCTAAAAGGAGGAAGCCTGCTTCTGTTCGGAGG
TTTAAACCGGAAACTGCCTCAGGTGTAATGAATGATTCCCAAGATGCTTTACCAAATGCT
ACTAGTGGCCCTTTTGTTGCATTCACGAAGGAAGGAATTCACAATCATGGATTTGTGGGC
AATGCTTTGGGTTGCAAAAATAAGTGGGATGATTCCAAAGATGCCTGTGCCATAACAGAA
ATTATAAAGCCTATGAGCTATTCGGCATCTGTATCGAGTGATTTTCAGGATGTGTCCGTG
ACCTTTTTAGCTAAGAGGTCTGATGGAAAGGAAGTTATGGTGGATAACAAGTTTCTGAAG
ATGAATAATCCACTTGTGTTGATAAACTTTTATGAGCAAAATCTTCGATATCATCCCACA
CAATGA

Peptide Sequence

PEP ID

XP_016509434.1
PEP Infomation

PREDICTED: chromo domain protein LHP1-like [Nicotiana tabacum]
Sequence

MKGGKQNSDAVAGDNGVSSEQPSTGASQAEQQERDGDAGEEDEDVGKEYEEKLEEEELAD
VEKPKLAEGFYEIEDVWRKRVRKGKVQYLIKWRGWPESANTWEPVENLMTCYDVIDAFEE
SLRSGKQRLARKRKRQHGVTHTQIKKQQQQQQCSPAAATNDVPAVKVSIMEEPMPSSPLA
SLDAINHVDSSGSGLNDIQVDGVANDNDLNFDSSIKEINEKNELDLKLSELKGGIATKET
SVDRSGDGLTSGFSAANGTESLQSGRCTGAKRRKPASVRRFKPETASGVMNDSQDALPNA
TSGPFVAFTKEGIHNHGFVGNALGCKNKWDDSKDACAITEIIKPMSYSASVSSDFQDVSV
TFLAKRSDGKEVMVDNKFLKMNNPLVLINFYEQNLRYHPTQ

Transcript Sequence

Gene sequence data has not been registered.